Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C666Fe2OG dioxygenase domain-containing protein. (382 aa)    
Predicted Functional Partners:
A0A484DPC9
FTO_NTD domain-containing protein.
     
 0.923
A0A484CW73
Fe2OG dioxygenase domain-containing protein.
   
  
 0.891
A0A484DKN5
2OG-FeII_Oxy_2 domain-containing protein.
      
 0.888
A0A484DBU6
Fe2OG dioxygenase domain-containing protein.
      
 0.887
A0A484CN89
Fe2OG dioxygenase domain-containing protein.
      
 0.884
A0A484CGU2
Uncharacterized protein.
      
 0.881
A0A484DHM9
Uncharacterized protein.
      
 0.877
A0A484C8C0
tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.784
A0A484C525
MTS domain-containing protein.
      
 0.769
A0A484C1L3
Uncharacterized protein; Belongs to the MT-A70-like family.
      
 0.693
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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