A0A484C675 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C675

Uncharacterized protein; Belongs to the cytochrome P450 family. (529 aa)

Predicted Functional Partners:

A0A484D2F7

0.915

A0A484CUV7

0.908

A0A484DCB6

0.898

A0A484DN25

0.871

A0A484D2W0

0.869

A0A484DAP3

0.868

A0A484CSL7

0.864

A0A484DGH4

0.863

A0A484DR65

0.859

A0A484CIR3

0.856

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C675	A0A484CIR3	Uncharacterized protein; Belongs to the cytochrome P450 family.	AB hydrolase-1 domain-containing protein.	0.856
A0A484C675	A0A484CSL7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.864
A0A484C675	A0A484CUV7	Uncharacterized protein; Belongs to the cytochrome P450 family.	3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.	0.908
A0A484C675	A0A484D2F7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cholesterol side-chain cleavage enzyme, mitochondrial; A cytochrome P450 monooxygenase that catalyzes the side-chain hydroxylation and cleavage of cholesterol to pregnenolone, the precursor of most steroid hormones. Catalyzes three sequential oxidation reactions of cholesterol, namely the hydroxylation at C22 followed with the hydroxylation at C20 to yield 20R,22R- hydroxycholesterol that is further cleaved between C20 and C22 to yield the C21-steroid pregnenolone and 4-methylpentanal. Mechanistically, uses molecular oxygen inserting one oxygen atom into a substrate and reducing the se [...]	0.915
A0A484C675	A0A484D2W0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.869
A0A484C675	A0A484DAP3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.868
A0A484C675	A0A484DCB6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.898
A0A484C675	A0A484DGH4	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cytochrome b5 heme-binding domain-containing protein.	0.863
A0A484C675	A0A484DN25	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.871
A0A484C675	A0A484DR65	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.859
A0A484CIR3	A0A484C675	AB hydrolase-1 domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.856
A0A484CIR3	A0A484D2F7	AB hydrolase-1 domain-containing protein.	Cholesterol side-chain cleavage enzyme, mitochondrial; A cytochrome P450 monooxygenase that catalyzes the side-chain hydroxylation and cleavage of cholesterol to pregnenolone, the precursor of most steroid hormones. Catalyzes three sequential oxidation reactions of cholesterol, namely the hydroxylation at C22 followed with the hydroxylation at C20 to yield 20R,22R- hydroxycholesterol that is further cleaved between C20 and C22 to yield the C21-steroid pregnenolone and 4-methylpentanal. Mechanistically, uses molecular oxygen inserting one oxygen atom into a substrate and reducing the se [...]	0.736
A0A484CIR3	A0A484D2W0	AB hydrolase-1 domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.736
A0A484CIR3	A0A484DAP3	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.850
A0A484CIR3	A0A484DN25	AB hydrolase-1 domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.736
A0A484CSL7	A0A484C675	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.864
A0A484CSL7	A0A484CUV7	Uncharacterized protein.	3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.	0.561
A0A484CSL7	A0A484D2F7	Uncharacterized protein.	Cholesterol side-chain cleavage enzyme, mitochondrial; A cytochrome P450 monooxygenase that catalyzes the side-chain hydroxylation and cleavage of cholesterol to pregnenolone, the precursor of most steroid hormones. Catalyzes three sequential oxidation reactions of cholesterol, namely the hydroxylation at C22 followed with the hydroxylation at C20 to yield 20R,22R- hydroxycholesterol that is further cleaved between C20 and C22 to yield the C21-steroid pregnenolone and 4-methylpentanal. Mechanistically, uses molecular oxygen inserting one oxygen atom into a substrate and reducing the se [...]	0.838
A0A484CSL7	A0A484D2W0	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.868
A0A484CSL7	A0A484DGH4	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.615