STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C685Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
A0A484CGN1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.865
A0A484C472
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
     
 0.844
A0A484C8Q9
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.812
A0A484CYL5
HECT domain-containing protein.
     
 0.801
A0A484CFZ8
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.773
A0A484CQ45
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.773
A0A484CS02
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.773
A0A484D5G9
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
   0.773
A0A484D7V8
Uncharacterized protein.
    
   0.773
A0A484D2M2
Uncharacterized protein.
   
    0.743
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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