STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C6A5Ubiquitin carboxyl-terminal hydrolase. (381 aa)    
Predicted Functional Partners:
A0A484CQG7
WD_REPEATS_REGION domain-containing protein.
    
 0.969
A0A484CBF1
WD_REPEATS_REGION domain-containing protein.
   
 0.906
A0A484DL21
WD_REPEATS_REGION domain-containing protein.
   
 0.906
A0A484CE37
WD_REPEATS_REGION domain-containing protein.
   
 0.894
A0A484CCQ2
Ubiquitin-like domain-containing protein.
    
 0.860
A0A484DFQ9
Uncharacterized protein.
    
 0.833
A0A484D1R8
Ubiquitin-like domain-containing protein.
    
 0.822
A0A484D411
Uncharacterized protein.
   
 0.801
A0A484CME9
Uncharacterized protein.
    
 0.790
A0A484CIS8
Uncharacterized protein.
    
 0.782
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.