STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C702Uncharacterized protein. (1604 aa)    
Predicted Functional Partners:
A0A484DP26
Protein kinase domain-containing protein.
    
 
 0.788
A0A484CJH0
Uncharacterized protein.
    
 
 0.716
A0A484CZP6
Uncharacterized protein.
    
 
 0.716
A0A484DPZ0
Uncharacterized protein.
    
 
 0.716
A0A484D489
CEP209_CC5 domain-containing protein.
    
 
 0.628
A0A484DDB1
Uncharacterized protein.
    
 
 0.623
A0A484C472
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
    
 
 0.619
A0A484C6A2
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
     
 0.598
A0A484D723
Uncharacterized protein.
     
 0.593
A0A484C4D3
Rib_recp_KP_reg domain-containing protein.
    
 0.588
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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