Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C705Homeobox domain-containing protein. (261 aa)    
Predicted Functional Partners:
A0A484D7Q6
Homeobox domain-containing protein.
   
   0.966
A0A484CLW4
Uncharacterized protein.
    
   0.741
A0A484CY87
Uncharacterized protein.
    
   0.741
A0A484D114
Uncharacterized protein.
    
   0.741
A0A484CBJ2
Paired domain-containing protein.
    
 
 0.727
A0A484D9D1
BHLH domain-containing protein.
    
 
 0.714
A0A484CAH8
Uncharacterized protein.
    
 
 0.684
A0A484CTB2
Uncharacterized protein.
      
 0.625
A0A484CAD3
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.624
A0A484C8P7
Uncharacterized protein.
      
 0.623
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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