Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C779Uncharacterized protein. (98 aa)    
Predicted Functional Partners:
A0A484CFW3
Uncharacterized protein.
    
 0.627
A0A484CUP0
Uncharacterized protein.
    
 0.627
A0A484D7H0
Uncharacterized protein.
    
 
 0.625
A0A484DNP0
Uncharacterized protein.
    
 
 0.625
A0A484C982
Uncharacterized protein.
    
 0.609
A0A484DJ41
B5 domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
      
 0.559
A0A484CES0
Uncharacterized protein.
      
 0.523
A0A484DP29
Uncharacterized protein.
      
 0.523
A0A484D7Z6
HRDC domain-containing protein.
     
 0.506
A0A484CEM4
Uncharacterized protein.
    
 
 0.467
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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