Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C785F5/8 type C domain-containing protein. (751 aa)    
Predicted Functional Partners:
A0A484CGC0
LRRCT domain-containing protein.
    
 0.575
A0A484DCP3
Uncharacterized protein.
     
  0.542
A0A484CN77
Uncharacterized protein.
    
 
 0.519
A0A484DJF7
Uncharacterized protein.
    
 0.499
A0A484CS82
Uncharacterized protein.
     
 0.468
A0A484C6X8
Protein YIPF.
     
  0.449
A0A484C4H3
Uncharacterized protein.
    
   0.438
A0A484D0E8
Uncharacterized protein.
     
  0.434
A0A484BYX7
Uncharacterized protein.
     
  0.423
A0A484D675
Uncharacterized protein.
     
  0.423
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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