Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C786Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (803 aa)    
Predicted Functional Partners:
A0A484DA27
Uncharacterized protein.
    
  0.914
A0A484CI90
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
 
 
0.870
A0A484C0X5
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 
0.868
A0A484DMR4
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 
0.868
A0A484CYQ2
Uncharacterized protein.
    
 0.861
A0A484DLX5
Uncharacterized protein.
    
 0.861
A0A484DMI1
Uncharacterized protein.
    
 0.861
A0A484CND2
Uncharacterized protein.
    
  0.788
A0A484DKW8
Uncharacterized protein.
    
  0.788
A0A484CL65
Uncharacterized protein.
    
  0.787
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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