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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C794Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
A0A484CEI5
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
   
 
 0.968
A0A484C857
Coiled-coil_56 domain-containing protein.
   
 0.965
A0A484D9L5
COX assembly mitochondrial protein.
   
 
 0.962
A0A484CVU1
Uncharacterized protein.
   
 0.890
A0A484D6N1
Uncharacterized protein.
   
 0.771
A0A484D6Q5
Uncharacterized protein.
   
 0.771
A0A484D496
Uncharacterized protein.
   
 0.758
A0A484D6R7
Uncharacterized protein.
   
 0.758
A0A484CD03
SAP domain-containing protein.
    
   0.740
A0A484CP21
Uncharacterized protein.
   
  0.733
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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