Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C7F0Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
A0A484CU15
Uncharacterized protein.
   
 0.998
A0A484D3E1
Uncharacterized protein.
    
 
 0.983
A0A484CWW0
Uncharacterized protein.
    
   0.973
A0A484CIZ3
ARID domain-containing protein.
    
 0.951
A0A484C3C4
Uncharacterized protein.
    
 0.942
A0A484C9U9
ARID domain-containing protein.
    
 0.942
A0A484CSS9
Inhibitor of growth protein.
    
 
 0.931
A0A484DC94
Uncharacterized protein.
    
 0.913
A0A484CC57
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.907
A0A484CEH1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.907
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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