STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C7L6Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
A0A484D6F7
HORMA domain-containing protein.
    
   0.584
A0A484DFI1
EGF-like domain-containing protein.
     
 0.572
A0A484CV51
TGF_BETA_2 domain-containing protein.
    
 0.555
A0A484CQK8
TGF_BETA_2 domain-containing protein.
    
 0.548
A0A484CE76
Left-right determination factor.
    
 0.530
A0A484CX60
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.526
A0A484D9H3
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.526
A0A484BYJ8
Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family.
    
 0.525
A0A484BYQ0
TGF_BETA_2 domain-containing protein.
    
 0.525
A0A484C1C5
TGF_BETA_2 domain-containing protein.
    
 0.525
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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