STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C7P7Uncharacterized protein. (2130 aa)    
Predicted Functional Partners:
A0A484C521
Guanylate kinase-like domain-containing protein.
   
 
 0.882
A0A484C4M1
Uncharacterized protein.
   
 
 0.857
A0A484DIB0
WD_REPEATS_REGION domain-containing protein.
   
  
 0.811
A0A484DJC9
Uncharacterized protein.
    
 
 0.807
A0A484C2I0
Uncharacterized protein.
   
  
 0.790
A0A484C0G3
Uncharacterized protein.
    
 
 0.763
A0A484BYB2
Uncharacterized protein.
    
 
 0.762
A0A484D677
Uncharacterized protein.
    
 
 0.727
A0A484CPH6
Uncharacterized protein.
    
   0.706
A0A484D8B1
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.706
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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