STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C7R5SWIB domain-containing protein. (535 aa)    
Predicted Functional Partners:
A0A484CI31
HMG box domain-containing protein.
   
 0.988
A0A484DMJ9
HMG box domain-containing protein.
   
 0.988
A0A484CZW8
Uncharacterized protein; Belongs to the actin family.
   
 0.987
A0A484DQ53
Uncharacterized protein.
    
 0.983
A0A484CIV3
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.979
A0A484DCF0
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.979
A0A484BZQ0
Uncharacterized protein.
   
 0.978
A0A484CF53
Uncharacterized protein.
   
 0.970
A0A484DDG8
Uncharacterized protein.
   
 0.970
A0A484DFH4
Uncharacterized protein.
    
 0.970
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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