STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C7W3Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
A0A484DHK9
Proteasome subunit alpha type.
   
 0.966
A0A484CQ84
Proteasome subunit alpha type.
   
 0.964
A0A484CJQ7
Proteasome subunit beta.
   
 0.958
A0A484C463
Proteasome subunit alpha type.
   
 0.956
A0A484D3Y4
Proteasome subunit alpha type.
   
 0.954
A0A484DPD5
Proteasome subunit beta.
   
 0.948
A0A484C0B5
Uncharacterized protein.
  
 
0.938
A0A484C1V3
Uncharacterized protein.
  
 
 
0.922
A0A484DC19
Proteasome subunit alpha type.
   
 0.922
A0A484DN83
MPN domain-containing protein.
   
 0.922
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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