A0A484C804 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C804

C-CAP/cofactor C-like domain-containing protein. (347 aa)

Predicted Functional Partners:

A0A484CHH9

0.992

A0A484C7U4

0.951

A0A484C2E0

0.903

A0A484CE28

0.903

A0A484CXR8

0.817

A0A484DIE2

0.741

A0A484CJV3

0.673

A0A484CN52

0.666

A0A484DJV7

0.666

A0A484CND5

0.617

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C2E0	A0A484C7U4	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.627
A0A484C2E0	A0A484C804	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	C-CAP/cofactor C-like domain-containing protein.	0.903
A0A484C2E0	A0A484CHH9	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	TFCD_C domain-containing protein.	0.520
A0A484C2E0	A0A484CND5	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.451
A0A484C7U4	A0A484C2E0	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.627
A0A484C7U4	A0A484C804	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	C-CAP/cofactor C-like domain-containing protein.	0.951
A0A484C7U4	A0A484CE28	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.627
A0A484C7U4	A0A484CHH9	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	TFCD_C domain-containing protein.	0.992
A0A484C7U4	A0A484CJV3	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.422
A0A484C7U4	A0A484CXR8	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.499
A0A484C7U4	A0A484DIE2	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	CAP-Gly domain-containing protein.	0.962
A0A484C804	A0A484C2E0	C-CAP/cofactor C-like domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.903
A0A484C804	A0A484C7U4	C-CAP/cofactor C-like domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.951
A0A484C804	A0A484CE28	C-CAP/cofactor C-like domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.903
A0A484C804	A0A484CHH9	C-CAP/cofactor C-like domain-containing protein.	TFCD_C domain-containing protein.	0.992
A0A484C804	A0A484CJV3	C-CAP/cofactor C-like domain-containing protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.673
A0A484C804	A0A484CN52	C-CAP/cofactor C-like domain-containing protein.	Uncharacterized protein.	0.666
A0A484C804	A0A484CND5	C-CAP/cofactor C-like domain-containing protein.	Uncharacterized protein.	0.617
A0A484C804	A0A484CXR8	C-CAP/cofactor C-like domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.817
A0A484C804	A0A484DIE2	C-CAP/cofactor C-like domain-containing protein.	CAP-Gly domain-containing protein.	0.741