Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C831Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
A0A484CH41
Uncharacterized protein.
    
 0.684
A0A484CE94
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.669
A0A484D9Y3
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.669
A0A484CCQ2
Ubiquitin-like domain-containing protein.
    
  0.636
A0A484CIS8
Uncharacterized protein.
    
  0.632
A0A484D1R8
Ubiquitin-like domain-containing protein.
    
  0.632
A0A484D3H3
Uncharacterized protein.
    
  0.632
A0A484CGF5
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.621
A0A484CGN1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.568
A0A484CLU4
Uncharacterized protein.
    
 0.568
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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