Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C842C-type lectin domain-containing protein. (2184 aa)    
Predicted Functional Partners:
A0A484C0Y0
Integrin beta; Belongs to the integrin beta chain family.
    
 0.910
A0A484CPS4
Integrin beta; Belongs to the integrin beta chain family.
    
 0.910
A0A484D8J4
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 
 0.905
A0A484DMH4
Uncharacterized protein.
    
 0.823
A0A484C4E6
Uncharacterized protein.
      
 0.564
A0A484CDN5
Uncharacterized protein.
     
  0.537
A0A484BZT1
Uncharacterized protein.
    
 0.532
A0A484C3Z1
Uncharacterized protein.
    
 
 0.515
A0A484CZC3
Uncharacterized protein.
     
  0.500
A0A484CZJ2
Uncharacterized protein.
     
  0.500
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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