STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C858LITAF domain-containing protein. (196 aa)    
Predicted Functional Partners:
A0A484C5E1
Helicase C-terminal domain-containing protein.
    
 0.972
A0A484CB36
Helicase ATP-binding domain-containing protein.
    
 0.972
A0A484DK48
LITAF domain-containing protein.
  
 
0.839
A0A484CG72
LITAF domain-containing protein.
  
 
0.835
A0A484DFD4
Uncharacterized protein.
   
 
 0.827
A0A484DH28
Rep-A_N domain-containing protein.
    
 0.751
A0A484DJW3
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.751
A0A484C9T9
Uncharacterized protein.
    
 0.745
A0A484C8Y1
DIRP domain-containing protein.
    
 0.725
A0A484BZZ8
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.699
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.