Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C893Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
A0A484CSF9
Uncharacterized protein.
      
 0.751
A0A484DAM7
Uncharacterized protein.
      
 0.747
A0A484CEW3
Uncharacterized protein; Belongs to the cyclin family.
      
 0.694
A0A484D920
SEFIR domain-containing protein.
      
 0.668
A0A484DGI0
SEFIR domain-containing protein.
      
 0.668
A0A484D2U7
Protein phosphatase 1 regulatory subunit.
      
 0.665
A0A484CRJ6
Uncharacterized protein.
      
 0.631
A0A484CYZ7
Cystatin domain-containing protein.
      
 0.631
A0A484DGC3
Uncharacterized protein.
      
 0.628
A0A484CQ80
LRRcap domain-containing protein.
      
 0.627
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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