STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C898Uncharacterized protein. (513 aa)    
Predicted Functional Partners:
A0A484DK87
Uncharacterized protein.
   
 
 0.638
A0A484CXY2
Homeobox domain-containing protein.
    
 
 0.597
A0A484CEZ6
BHLH domain-containing protein.
      
 0.536
A0A484CUR9
Homeobox domain-containing protein.
   
 
 0.501
A0A484CF44
Uncharacterized protein.
   
 
 0.472
A0A484C3R6
JmjC domain-containing protein.
  
   
 0.447
A0A484DNZ3
Uncharacterized protein.
      
 0.439
A0A484C2F9
Homeobox domain-containing protein.
    
 
 0.416
A0A484C768
Homeobox domain-containing protein.
    
 
 0.416
A0A484CBZ3
Homeobox domain-containing protein.
    
 
 0.416
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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