STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C8S0B30.2/SPRY domain-containing protein. (283 aa)    
Predicted Functional Partners:
A7XLX5_PERFV
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
   0.709
A0A484CCU4
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.708
A0A484CKH1
Ribosomal_L7Ae domain-containing protein.
   
   0.708
A0A484CV53
Ribosomal_L2_C domain-containing protein.
   
   0.708
A0A484D3U4
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
   
   0.708
A0A484C166
Uncharacterized protein.
   
   0.707
A0A484C661
Ribosomal_S10 domain-containing protein.
    
   0.706
A0A484CDU1
Ribosomal_L7Ae domain-containing protein.
    
   0.706
A0A484CE77
Ribosomal protein L37; Binds to the 23S rRNA.
    
   0.706
A0A484CFZ8
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.706
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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