A0A484C8Z1 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C8Z1

Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (602 aa)

Predicted Functional Partners:

A0A484CI40

0.966

A0A484CWM5

0.907

A0A484C470

0.892

A0A484D744

0.869

A0A484D9M3

0.869

A0A484CJA7

0.762

A0A484CKQ8

0.762

A0A484D1S8

0.762

A0A484D2G9

0.762

A0A484DN43

0.762

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C470	A0A484C8Z1	TPR_REGION domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.892
A0A484C470	A0A484CJA7	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.895
A0A484C470	A0A484CKQ8	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.895
A0A484C470	A0A484CWM5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.997
A0A484C470	A0A484D1S8	TPR_REGION domain-containing protein.	Bardet-Biedl syndrome 2 protein homolog.	0.996
A0A484C470	A0A484D2G9	TPR_REGION domain-containing protein.	AMP-binding domain-containing protein.	0.895
A0A484C470	A0A484D744	TPR_REGION domain-containing protein.	PHTB1_C domain-containing protein.	0.982
A0A484C470	A0A484D9M3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.997
A0A484C470	A0A484DN43	TPR_REGION domain-containing protein.	AMP-binding domain-containing protein.	0.895
A0A484C8Z1	A0A484C470	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	TPR_REGION domain-containing protein.	0.892
A0A484C8Z1	A0A484CI40	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.966
A0A484C8Z1	A0A484CJA7	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.762
A0A484C8Z1	A0A484CKQ8	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.762
A0A484C8Z1	A0A484CWM5	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.907
A0A484C8Z1	A0A484D1S8	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Bardet-Biedl syndrome 2 protein homolog.	0.762
A0A484C8Z1	A0A484D2G9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	AMP-binding domain-containing protein.	0.762
A0A484C8Z1	A0A484D744	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	PHTB1_C domain-containing protein.	0.869
A0A484C8Z1	A0A484D9M3	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.869
A0A484C8Z1	A0A484DN43	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	AMP-binding domain-containing protein.	0.762
A0A484CI40	A0A484C8Z1	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.966