Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C908H15 domain-containing protein. (194 aa)    
Predicted Functional Partners:
A0A484D6L4
CIDE-N domain-containing protein.
    
 0.810
A0A484CB01
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.799
A0A484CJZ0
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.799
A0A484DIF3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.799
A0A484DIH5
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.799
A0A484C7V9
Histone H2A; Belongs to the histone H2A family.
   
 
 0.792
A0A484DDF9
Histone H2A; Belongs to the histone H2A family.
   
 
 0.792
A0A484CTF8
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.768
A0A484D113
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.768
A0A484D7P1
CCHC-type domain-containing protein.
    
   0.762
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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