A0A484C926 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C926

HD_domain domain-containing protein. (116 aa)

Predicted Functional Partners:

A0A484CIR3

0.873

A0A484DKW4

0.829

A0A484C9Z9

0.821

A0A484CCT6

0.821

A0A484C8U6

0.819

A0A484C334

0.812

A0A484DDC6

0.807

A0A484C821

0.792

A0A484DG63

0.792

A0A484C4J7

0.791

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C334	A0A484C4J7	Uncharacterized protein.	Thymidylate_kin domain-containing protein.	0.889
A0A484C334	A0A484C821	Uncharacterized protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.819
A0A484C334	A0A484C8U6	Uncharacterized protein.	Thymidylat_synt domain-containing protein.	0.852
A0A484C334	A0A484C926	Uncharacterized protein.	HD_domain domain-containing protein.	0.812
A0A484C334	A0A484C9Z9	Uncharacterized protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.854
A0A484C334	A0A484CCT6	Uncharacterized protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.854
A0A484C334	A0A484CIR3	Uncharacterized protein.	AB hydrolase-1 domain-containing protein.	0.808
A0A484C334	A0A484DG63	Uncharacterized protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.819
A0A484C334	A0A484DKW4	Uncharacterized protein.	Thymidine kinase.	0.885
A0A484C4J7	A0A484C334	Thymidylate_kin domain-containing protein.	Uncharacterized protein.	0.889
A0A484C4J7	A0A484C821	Thymidylate_kin domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.822
A0A484C4J7	A0A484C8U6	Thymidylate_kin domain-containing protein.	Thymidylat_synt domain-containing protein.	0.931
A0A484C4J7	A0A484C926	Thymidylate_kin domain-containing protein.	HD_domain domain-containing protein.	0.791
A0A484C4J7	A0A484C9Z9	Thymidylate_kin domain-containing protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.839
A0A484C4J7	A0A484CCT6	Thymidylate_kin domain-containing protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.839
A0A484C4J7	A0A484CIR3	Thymidylate_kin domain-containing protein.	AB hydrolase-1 domain-containing protein.	0.887
A0A484C4J7	A0A484DG63	Thymidylate_kin domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.822
A0A484C4J7	A0A484DKW4	Thymidylate_kin domain-containing protein.	Thymidine kinase.	0.929
A0A484C821	A0A484C334	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Uncharacterized protein.	0.819
A0A484C821	A0A484C4J7	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	Thymidylate_kin domain-containing protein.	0.822