A0A484C932 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C932

TLDc domain-containing protein. (568 aa)

Predicted Functional Partners:

A0A484CKF7

0.974

A0A484CEC1

0.851

A0A484CFB7

0.851

A0A484CGR5

0.851

A0A484CN26

0.838

A0A484DAF0

0.838

A0A484D9N7

0.769

A0A484D300

0.706

A0A484C4V6

0.691

A0A484C8F2

0.691

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C4V6	A0A484C932	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	TLDc domain-containing protein.	0.691
A0A484C4V6	A0A484CN26	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.552
A0A484C4V6	A0A484DAF0	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.552
A0A484C8F2	A0A484C932	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	TLDc domain-containing protein.	0.691
A0A484C8F2	A0A484CN26	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.552
A0A484C8F2	A0A484DAF0	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.552
A0A484C932	A0A484C4V6	TLDc domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.691
A0A484C932	A0A484C8F2	TLDc domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.691
A0A484C932	A0A484CEC1	TLDc domain-containing protein.	ATP-synt_ab domain-containing protein.	0.851
A0A484C932	A0A484CFB7	TLDc domain-containing protein.	Uncharacterized protein.	0.851
A0A484C932	A0A484CGR5	TLDc domain-containing protein.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.851
A0A484C932	A0A484CKF7	TLDc domain-containing protein.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.974
A0A484C932	A0A484CN26	TLDc domain-containing protein.	Uncharacterized protein.	0.838
A0A484C932	A0A484D300	TLDc domain-containing protein.	TLDc domain-containing protein.	0.706
A0A484C932	A0A484D9N7	TLDc domain-containing protein.	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	0.769
A0A484C932	A0A484DAF0	TLDc domain-containing protein.	Uncharacterized protein.	0.838
A0A484CEC1	A0A484C932	ATP-synt_ab domain-containing protein.	TLDc domain-containing protein.	0.851
A0A484CEC1	A0A484CKF7	ATP-synt_ab domain-containing protein.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.974
A0A484CEC1	A0A484D300	ATP-synt_ab domain-containing protein.	TLDc domain-containing protein.	0.547
A0A484CFB7	A0A484C932	Uncharacterized protein.	TLDc domain-containing protein.	0.851