STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C949NYD-SP28 domain-containing protein. (478 aa)    
Predicted Functional Partners:
A0A484DIB0
WD_REPEATS_REGION domain-containing protein.
   
  
 0.859
A0A484C4M1
Uncharacterized protein.
   
   0.849
A0A484C562
Uncharacterized protein.
   
   0.835
A0A484D882
Uncharacterized protein.
    
 
 0.805
A0A484CE50
Uncharacterized protein.
   
    0.776
A0A484DAM4
GAS domain-containing protein.
    
 
 0.737
A0A484DNK8
GAS domain-containing protein.
    
 
 0.737
A0A484DBQ3
Uncharacterized protein.
   
 
 0.723
A0A484C5X6
Uncharacterized protein.
   
 
 0.719
A0A484C9N0
Uncharacterized protein.
     
 0.714
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.