Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C956Lebercilin domain-containing protein. (807 aa)    
Predicted Functional Partners:
A0A484CKG8
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.973
A0A484DJA2
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.966
A0A484CUX8
Cyclic nucleotide-binding domain-containing protein.
    
 0.963
A0A484CV78
Uncharacterized protein.
    
 0.963
A0A484CZ11
Uncharacterized protein.
    
 0.963
A0A484DR62
Uncharacterized protein.
   
 0.963
A0A484CYW4
Uncharacterized protein.
    
 0.952
A0A484CBY9
TPR_REGION domain-containing protein.
    
 0.944
A0A484D3Z8
Uncharacterized protein.
   
 0.928
A0A484DHL9
Uncharacterized protein.
   
 0.928
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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