A0A484C973 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C973

Uncharacterized protein. (856 aa)

Predicted Functional Partners:

A0A484D3S3

0.744

A0A484CPJ3

0.677

A0A484DLS9

0.657

A0A484CWL0

0.645

A0A484CAL1

0.630

QRSL1

0.629

A0A484CF68

0.629

A0A484D9M4

0.629

A0A484C141

0.626

A0A484C1J6

0.626

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A484C141	A0A484C1J6	A0A484C141	A0A484C1J6	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.548
A0A484C141	A0A484C973	A0A484C141	A0A484C973	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.626
A0A484C141	A0A484D9M4	A0A484C141	A0A484D9M4	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.626
A0A484C1J6	A0A484C141	A0A484C1J6	A0A484C141	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.548
A0A484C1J6	A0A484C973	A0A484C1J6	A0A484C973	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.626
A0A484C1J6	A0A484D9M4	A0A484C1J6	A0A484D9M4	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.633
A0A484C973	A0A484C141	A0A484C973	A0A484C141	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.626
A0A484C973	A0A484C1J6	A0A484C973	A0A484C1J6	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.626
A0A484C973	A0A484CAL1	A0A484C973	A0A484CAL1	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.630
A0A484C973	A0A484CF68	A0A484C973	A0A484CF68	Uncharacterized protein.	Uncharacterized protein.	0.629
A0A484C973	A0A484CPJ3	A0A484C973	A0A484CPJ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	0.677
A0A484C973	A0A484CWL0	A0A484C973	A0A484CWL0	Uncharacterized protein.	Uncharacterized protein.	0.645
A0A484C973	A0A484D3S3	A0A484C973	A0A484D3S3	Uncharacterized protein.	C2 domain-containing protein.	0.744
A0A484C973	A0A484D9M4	A0A484C973	A0A484D9M4	Uncharacterized protein.	Uncharacterized protein.	0.629
A0A484C973	A0A484DLS9	A0A484C973	A0A484DLS9	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A484C973	QRSL1	A0A484C973	A0A484C4T0	Uncharacterized protein.	Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.	0.629
A0A484CAL1	A0A484C973	A0A484CAL1	A0A484C973	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.630
A0A484CF68	A0A484C973	A0A484CF68	A0A484C973	Uncharacterized protein.	Uncharacterized protein.	0.629
A0A484CF68	A0A484CWL0	A0A484CF68	A0A484CWL0	Uncharacterized protein.	Uncharacterized protein.	0.617
A0A484CF68	A0A484DLS9	A0A484CF68	A0A484DLS9	Uncharacterized protein.	Uncharacterized protein.	0.652