A0A484C982 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C982

Uncharacterized protein. (313 aa)

Predicted Functional Partners:

A0A484CH28

0.984

A0A484D8S5

0.984

A0A484D245

0.891

A0A484BXZ7

0.884

QTRT1

0.884

A0A484D3N6

0.883

A0A484CAQ2

0.769

A0A484CED4

0.727

A0A484CSR7

0.681

A0A484CTZ2

0.679

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A484BXZ7	A0A484C982	A0A484BXZ7	A0A484C982	Nt_Gln_amidase domain-containing protein.	Uncharacterized protein.	0.884
A0A484BXZ7	A0A484CAQ2	A0A484BXZ7	A0A484CAQ2	Nt_Gln_amidase domain-containing protein.	Uncharacterized protein.	0.525
A0A484BXZ7	A0A484CSR7	A0A484BXZ7	A0A484CSR7	Nt_Gln_amidase domain-containing protein.	Uncharacterized protein.	0.439
A0A484BXZ7	A0A484CTZ2	A0A484BXZ7	A0A484CTZ2	Nt_Gln_amidase domain-containing protein.	Protein-serine/threonine kinase.	0.878
A0A484BXZ7	A0A484D245	A0A484BXZ7	A0A484D245	Nt_Gln_amidase domain-containing protein.	Uncharacterized protein.	0.894
A0A484BXZ7	A0A484D3N6	A0A484BXZ7	A0A484D3N6	Nt_Gln_amidase domain-containing protein.	GOLD domain-containing protein.	0.701
A0A484BXZ7	QTRT1	A0A484BXZ7	A0A484CM66	Nt_Gln_amidase domain-containing protein.	Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...]	0.892
A0A484C982	A0A484BXZ7	A0A484C982	A0A484BXZ7	Uncharacterized protein.	Nt_Gln_amidase domain-containing protein.	0.884
A0A484C982	A0A484CAQ2	A0A484C982	A0A484CAQ2	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A484C982	A0A484CED4	A0A484C982	A0A484CED4	Uncharacterized protein.	J domain-containing protein.	0.727
A0A484C982	A0A484CH28	A0A484C982	A0A484CH28	Uncharacterized protein.	Chloride channel protein.	0.984
A0A484C982	A0A484CSR7	A0A484C982	A0A484CSR7	Uncharacterized protein.	Uncharacterized protein.	0.681
A0A484C982	A0A484CTZ2	A0A484C982	A0A484CTZ2	Uncharacterized protein.	Protein-serine/threonine kinase.	0.679
A0A484C982	A0A484D245	A0A484C982	A0A484D245	Uncharacterized protein.	Uncharacterized protein.	0.891
A0A484C982	A0A484D3N6	A0A484C982	A0A484D3N6	Uncharacterized protein.	GOLD domain-containing protein.	0.883
A0A484C982	A0A484D8S5	A0A484C982	A0A484D8S5	Uncharacterized protein.	Chloride channel protein.	0.984
A0A484C982	QTRT1	A0A484C982	A0A484CM66	Uncharacterized protein.	Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...]	0.884
A0A484CAQ2	A0A484BXZ7	A0A484CAQ2	A0A484BXZ7	Uncharacterized protein.	Nt_Gln_amidase domain-containing protein.	0.525
A0A484CAQ2	A0A484C982	A0A484CAQ2	A0A484C982	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A484CAQ2	A0A484CSR7	A0A484CAQ2	A0A484CSR7	Uncharacterized protein.	Uncharacterized protein.	0.682