STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C989Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
A0A484CW71
RRM domain-containing protein.
   
 
 0.998
A0A484C7X0
Brix domain-containing protein.
   
 
 0.995
A0A484D272
Uncharacterized protein.
   
 
 0.995
A0A484CLY0
Brix domain-containing protein.
   
 
 0.994
A0A484CUD8
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.994
A0A484CW56
RNA helicase.
   
 
 0.994
A0A484DF24
Uncharacterized protein.
   
 
 0.994
A0A484DDE2
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.993
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.992
A0A484CG77
CBF domain-containing protein.
   
 
 0.992
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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