A0A484C992 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C992

Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (517 aa)

Predicted Functional Partners:

A0A484DIG2

0.995

A0A484CNS1

0.987

A0A484CXE0

0.987

A0A484DAV3

0.987

A0A484C5N4

0.984

A0A484CER0

0.984

A0A484CKK9

0.984

A0A484CK33

0.983

A0A484CCX8

0.963

A0A484C4I0

0.936

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C4I0	A0A484C5N4	BUB1 N-terminal domain-containing protein.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.755
A0A484C4I0	A0A484C992	BUB1 N-terminal domain-containing protein.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.936
A0A484C4I0	A0A484CCX8	BUB1 N-terminal domain-containing protein.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.897
A0A484C4I0	A0A484CER0	BUB1 N-terminal domain-containing protein.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.755
A0A484C4I0	A0A484CK33	BUB1 N-terminal domain-containing protein.	Shugoshin_C domain-containing protein.	0.982
A0A484C4I0	A0A484CKK9	BUB1 N-terminal domain-containing protein.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.755
A0A484C4I0	A0A484CNS1	BUB1 N-terminal domain-containing protein.	Serine/threonine-protein phosphatase; Belongs to the SKP1 family.	0.901
A0A484C4I0	A0A484CXE0	BUB1 N-terminal domain-containing protein.	Serine/threonine-protein phosphatase.	0.901
A0A484C4I0	A0A484DAV3	BUB1 N-terminal domain-containing protein.	Serine/threonine-protein phosphatase.	0.901
A0A484C4I0	A0A484DIG2	BUB1 N-terminal domain-containing protein.	Uncharacterized protein.	0.638
A0A484C5N4	A0A484C4I0	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	BUB1 N-terminal domain-containing protein.	0.755
A0A484C5N4	A0A484C992	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.984
A0A484C5N4	A0A484CCX8	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.980
A0A484C5N4	A0A484CER0	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.900
A0A484C5N4	A0A484CK33	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Shugoshin_C domain-containing protein.	0.976
A0A484C5N4	A0A484CKK9	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.901
A0A484C5N4	A0A484CNS1	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Serine/threonine-protein phosphatase; Belongs to the SKP1 family.	0.988
A0A484C5N4	A0A484CXE0	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Serine/threonine-protein phosphatase.	0.988
A0A484C5N4	A0A484DAV3	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Serine/threonine-protein phosphatase.	0.988
A0A484C5N4	A0A484DIG2	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	Uncharacterized protein.	0.993