STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C993WD_REPEATS_REGION domain-containing protein. (705 aa)    
Predicted Functional Partners:
A0A484DMX3
CPSF_A domain-containing protein.
    
 0.999
A0A484CKX6
RING-type domain-containing protein.
    
 0.995
A0A484DC07
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.992
A0A484CG04
CDT1 domain-containing protein.
   
 
 0.972
A0A484DQ42
Uncharacterized protein.
   
  
 0.957
A0A484CXH1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.944
A0A484DNA9
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.944
A0A484DR53
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.944
A0A484DBR3
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 
 0.938
A0A484DEF3
Uncharacterized protein.
   
  
 0.930
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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