STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C994CCHC-type domain-containing protein. (252 aa)    
Predicted Functional Partners:
A0A484D7P1
CCHC-type domain-containing protein.
   
   0.850
A0A484CXZ8
KOW domain-containing protein.
   
 
 0.754
A0A484CK18
OTU domain-containing protein.
    
   0.709
A0A484C6F2
Sm domain-containing protein.
   
  0.699
A0A484D6Z4
Small nuclear ribonucleoprotein G.
   
  0.695
A0A484C152
Uncharacterized protein.
  
 
 0.674
A0A484CR37
Uncharacterized protein.
   
 
 0.671
A0A484C964
BHLH domain-containing protein.
    
 
 0.668
A0A484CGN1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.651
A0A484CWW8
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.649
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.