A0A484C9C7 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484C9C7

Fe2OG dioxygenase domain-containing protein. (321 aa)

Predicted Functional Partners:

A0A484D3I3

0.625

A0A484D3Z5

0.625

A0A484DD53

0.625

A0A484DJL0

0.572

A0A484DAX4

0.523

A0A484C9T9

0.522

A0A484CDG2

0.443

A0A484CIC5

0.410

A0A484CIE5

0.410

A0A484CVU3

0.406

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484C9C7	A0A484C9T9	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.522
A0A484C9C7	A0A484CDG2	Fe2OG dioxygenase domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.443
A0A484C9C7	A0A484CIC5	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.410
A0A484C9C7	A0A484CIE5	Fe2OG dioxygenase domain-containing protein.	Ras-GEF domain-containing protein.	0.410
A0A484C9C7	A0A484CVU3	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.406
A0A484C9C7	A0A484D3I3	Fe2OG dioxygenase domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.625
A0A484C9C7	A0A484D3Z5	Fe2OG dioxygenase domain-containing protein.	Treslin_N domain-containing protein.	0.625
A0A484C9C7	A0A484DAX4	Fe2OG dioxygenase domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.523
A0A484C9C7	A0A484DD53	Fe2OG dioxygenase domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.625
A0A484C9C7	A0A484DJL0	Fe2OG dioxygenase domain-containing protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.572
A0A484C9T9	A0A484C9C7	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.522
A0A484C9T9	A0A484CIC5	Uncharacterized protein.	Uncharacterized protein.	0.406
A0A484C9T9	A0A484CIE5	Uncharacterized protein.	Ras-GEF domain-containing protein.	0.406
A0A484CDG2	A0A484C9C7	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	Fe2OG dioxygenase domain-containing protein.	0.443
A0A484CDG2	A0A484CVU3	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	Uncharacterized protein.	0.791
A0A484CIC5	A0A484C9C7	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.410
A0A484CIC5	A0A484C9T9	Uncharacterized protein.	Uncharacterized protein.	0.406
A0A484CIE5	A0A484C9C7	Ras-GEF domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.410
A0A484CIE5	A0A484C9T9	Ras-GEF domain-containing protein.	Uncharacterized protein.	0.406
A0A484CVU3	A0A484C9C7	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.406