STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C9N6HIT domain-containing protein. (92 aa)    
Predicted Functional Partners:
A0A484CXT4
SprT-like domain-containing protein.
    
 0.714
A0A484DGH4
Cytochrome b5 heme-binding domain-containing protein.
  
  0.694
A0A484C3G0
Uncharacterized protein.
   
 0.684
A0A484CF19
Uncharacterized protein.
   
 0.684
A0A484DPK4
Uncharacterized protein.
   
 0.684
A0A484CVP2
Thioredoxin domain-containing protein; Belongs to the NDK family.
  
 0.675
A0A484C5I2
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
    
 0.638
A0A484CHU1
Uncharacterized protein.
    
 0.627
A0A484CRI9
Uncharacterized protein.
  
 0.618
A0A484C8U6
Thymidylat_synt domain-containing protein.
  
 
  0.607
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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