STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484C9R5Uncharacterized protein. (829 aa)    
Predicted Functional Partners:
A0A484CUQ3
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.763
A0A484DGH5
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.763
A0A484CZC9
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.738
A0A484C8V2
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.731
A0A484DQ08
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.731
A0A484DJW1
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.719
A0A484CAF3
Uncharacterized protein.
    
   0.715
A0A484CDJ5
OBG-type G domain-containing protein.
    
   0.715
A0A484D1C5
Uncharacterized protein.
    
   0.715
A0A484D3M4
Uncharacterized protein.
    
   0.715
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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