STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CA65Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
A0A484DFD7
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.882
A0A484D840
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
  0.880
A0A484C2W4
Uncharacterized protein.
    
 0.877
A0A484CEM7
Uncharacterized protein.
   
 0.875
A0A484D644
Uncharacterized protein; Belongs to the actin family.
    
  0.875
A0A484D9F8
YL1_C domain-containing protein.
    
 0.869
A0A484CY90
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.865
A0A484D823
Uncharacterized protein.
    
  0.864
A0A484C2U6
Uncharacterized protein.
    
 0.855
A0A484CEY8
Uncharacterized protein.
    
 0.855
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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