STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CA70HMG box domain-containing protein. (495 aa)    
Predicted Functional Partners:
A0A484DA27
Uncharacterized protein.
    
 0.986
A0A484DPC7
Uncharacterized protein.
     
 0.984
A0A484CL65
Uncharacterized protein.
    
 0.952
A0A484CND2
Uncharacterized protein.
    
 0.902
A0A484DKW8
Uncharacterized protein.
    
 0.902
A0A484CFS7
Uncharacterized protein.
   
 0.901
A0A484DKM0
Uncharacterized protein.
   
 0.901
A0A484CEU0
Mothers against decapentaplegic homolog.
    
 0.900
A0A484CT54
Mothers against decapentaplegic homolog.
    
 0.900
A0A484DBT9
Mothers against decapentaplegic homolog.
    
 0.900
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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