STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CA81Uncharacterized protein. (957 aa)    
Predicted Functional Partners:
A0A484C9F6
Uncharacterized protein.
   
 
 0.950
A0A484C589
Uncharacterized protein.
    
 
 0.936
A0A484DCZ2
LsmAD domain-containing protein.
    
 
 0.685
A0A484C8T3
LsmAD domain-containing protein.
    
 
 0.597
A0A484C9V5
AD domain-containing protein.
    
 
 0.542
A0A484CSA5
Uncharacterized protein.
      
 0.523
A0A484DRU1
Uncharacterized protein.
      
 0.523
RTCB
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
    
 
 0.503
A0A484DPT3
Tr-type G domain-containing protein.
    
  0.502
A0A484DC91
Uncharacterized protein.
    
 
 0.499
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: low (12%) [HD]