STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAA0Homeobox domain-containing protein. (340 aa)    
Predicted Functional Partners:
A0A484CMQ4
Uncharacterized protein.
    
 0.780
A0A484CQ40
Uncharacterized protein.
    
 0.780
A0A484DIH0
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.757
A0A484DM22
zf-Tim10_DDP domain-containing protein.
   
 0.737
A0A484C0H5
Fork-head domain-containing protein.
   
 0.683
A0A484CQX5
Uncharacterized protein.
   
 
 0.654
A0A484C9Y5
zf-Tim10_DDP domain-containing protein.
   
 
 0.651
A0A484CS76
zf-Tim10_DDP domain-containing protein.
   
 
 0.651
A0A484CGT7
Uncharacterized protein.
   
 
 0.646
A0A484CJS5
T-box_assoc domain-containing protein.
   
 0.616
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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