Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAB8Uncharacterized protein. (281 aa)    
Predicted Functional Partners:
A0A484DL56
Dynein light chain.
    
   0.734
A0A484CUI2
Uncharacterized protein.
   
 
 0.642
A0A484C7R7
Uncharacterized protein.
      
 0.630
A0A484D7Y0
Uncharacterized protein.
      
 0.628
A0A484DNZ3
Uncharacterized protein.
    
 
 0.601
A0A484D1T2
Uncharacterized protein.
    
   0.597
A0A484BXP7
Uncharacterized protein.
   
   0.591
A0A484DGJ9
B30.2/SPRY domain-containing protein.
    
 
 0.580
A0A484CNU5
Uncharacterized protein.
    
   0.575
A0A484CJ84
CS domain-containing protein.
    
   0.572
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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