Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAM0Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
A0A484C159
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.586
A0A484CGJ2
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.586
A0A484CNI8
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.586
A0A484DIP0
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.586
A0A484C327
PCI domain-containing protein.
    
  0.503
A0A484CKX6
RING-type domain-containing protein.
    
 0.469
A0A484DJ50
RING-type domain-containing protein.
    
 0.469
A0A484D723
Uncharacterized protein.
     
  0.424
A0A484DPB8
PCI domain-containing protein.
   
  0.417
A0A484CHN4
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.414
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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