Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAM2Uncharacterized protein. (3839 aa)    
Predicted Functional Partners:
A0A484C1U0
Uncharacterized protein.
   
 
 0.846
A0A484CFS6
Uncharacterized protein.
    
 
 0.729
A0A484D3U8
Uncharacterized protein.
    
 0.707
A0A484DNJ6
Uncharacterized protein.
   
 
 0.693
A0A484DFP4
Uncharacterized protein.
    
 
 0.675
A0A484CCC1
LisH domain-containing protein.
      
 0.673
A0A484CIF1
Uncharacterized protein.
    
 
 0.664
A0A484C8G1
B12-binding domain-containing protein.
      
 0.650
A0A484CF86
SAC domain-containing protein.
   
  
 0.649
A0A484C9S7
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.633
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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