Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAM6Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
A0A484CY93
Uncharacterized protein.
    
 0.993
A0A484CD67
Uncharacterized protein.
    
 0.840
A0A484DCD4
Uncharacterized protein.
    
 
 0.840
A0A484C5E3
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.771
A0A484D243
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.752
A0A484C6P5
Uncharacterized protein; Belongs to the actin family.
    
   0.733
A0A484CHT1
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
   0.733
A0A484DAI4
Protein kinase domain-containing protein.
    
   0.722
A0A484DJC2
Protein kinase domain-containing protein.
    
   0.722
A0A484CKP1
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
     
  0.664
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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