STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAM9Homeobox protein. (294 aa)    
Predicted Functional Partners:
A0A484DA27
Uncharacterized protein.
    
 
 0.793
A0A484CB10
Uncharacterized protein.
      
 0.769
A0A484C6W4
RRM domain-containing protein.
    
   0.688
A0A484DPQ4
HMG box domain-containing protein.
    
 
 0.687
A0A484CBZ4
Uncharacterized protein.
      
 0.681
A0A484CAD8
Triacylglycerol lipase; Belongs to the AB hydrolase superfamily. Lipase family.
    
 
 0.667
A0A484CAL9
PLAT domain-containing protein.
    
 
 0.667
A0A484C3X0
LRRCT domain-containing protein.
      
 0.665
A0A484C0Z6
PX domain-containing protein.
      
 0.653
A0A484CEQ8
Uncharacterized protein.
      
 0.650
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.