STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAM9Homeobox protein. (294 aa)    
Predicted Functional Partners:
A0A484DA27
Uncharacterized protein.
    
 
 0.522
A0A484C3X0
LRRCT domain-containing protein.
    
 
 0.465
A0A484C0Z6
PX domain-containing protein.
      
 0.446
A0A484CYI0
Uncharacterized protein.
    
 
 0.445
A0A484CR11
Uncharacterized protein.
      
 0.430
A0A484CVW1
POU domain protein.
   
 
 0.426
A0A484CAJ6
PUM-HD domain-containing protein.
    
   0.416
A0A484CQ25
PUM-HD domain-containing protein.
    
   0.416
A0A484CUC5
DNA helicase; Belongs to the MCM family.
      
 0.414
A0A484DAE0
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.414
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.