A0A484CAN6 protein (Perca flavescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A484CAN6

Protein kinase domain-containing protein. (962 aa)

Predicted Functional Partners:

A0A484CCE4

0.969

A0A484D087

0.969

A0A484CVU3

0.899

A0A484CS89

0.768

A0A484CA13

0.756

A0A484CQ65

0.754

A0A484DBJ2

0.754

A0A484DKG0

0.754

A0A484CH41

0.745

A0A484D1N6

0.713

Your Current Organism:

Perca flavescens

NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A484CA13	A0A484CAN6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.756
A0A484CA13	A0A484CH41	Uncharacterized protein.	Uncharacterized protein.	0.593
A0A484CA13	A0A484CQ65	Uncharacterized protein.	Serine/threonine-protein kinase PLK.	0.888
A0A484CA13	A0A484CVU3	Uncharacterized protein.	Uncharacterized protein.	0.988
A0A484CA13	A0A484DBJ2	Uncharacterized protein.	Serine/threonine-protein kinase PLK.	0.888
A0A484CA13	A0A484DKG0	Uncharacterized protein.	Serine/threonine-protein kinase PLK.	0.888
A0A484CAN6	A0A484CA13	Protein kinase domain-containing protein.	Uncharacterized protein.	0.756
A0A484CAN6	A0A484CCE4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.969
A0A484CAN6	A0A484CH41	Protein kinase domain-containing protein.	Uncharacterized protein.	0.745
A0A484CAN6	A0A484CQ65	Protein kinase domain-containing protein.	Serine/threonine-protein kinase PLK.	0.754
A0A484CAN6	A0A484CS89	Protein kinase domain-containing protein.	Uncharacterized protein.	0.768
A0A484CAN6	A0A484CVU3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.899
A0A484CAN6	A0A484D087	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.969
A0A484CAN6	A0A484D1N6	Protein kinase domain-containing protein.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.713
A0A484CAN6	A0A484DBJ2	Protein kinase domain-containing protein.	Serine/threonine-protein kinase PLK.	0.754
A0A484CAN6	A0A484DKG0	Protein kinase domain-containing protein.	Serine/threonine-protein kinase PLK.	0.754
A0A484CCE4	A0A484CAN6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.969
A0A484CCE4	A0A484CVU3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.552
A0A484CH41	A0A484CA13	Uncharacterized protein.	Uncharacterized protein.	0.593
A0A484CH41	A0A484CAN6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.745