STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAP8Uncharacterized protein. (647 aa)    
Predicted Functional Partners:
A0A484C3C4
Uncharacterized protein.
    
 0.834
A0A484C9U9
ARID domain-containing protein.
    
 0.834
A0A484CIZ3
ARID domain-containing protein.
    
 0.834
A0A484CMZ8
SGF29 C-terminal domain-containing protein.
   
 0.804
A0A484DHJ0
Uncharacterized protein.
    
 0.801
A0A484D1M3
RPOLD domain-containing protein.
   
 0.767
A0A484CZY0
Uncharacterized protein.
   
 0.765
A0A484CKG6
Uncharacterized protein.
   
 0.764
A0A484DFD7
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.758
A0A484CS47
YL1_C domain-containing protein.
    
 0.756
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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