STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAR2Uncharacterized protein. (572 aa)    
Predicted Functional Partners:
A0A484CDH5
Uncharacterized protein.
 
     0.770
A0A484DL56
Dynein light chain.
    
 
 0.528
A0A484BZW6
Uncharacterized protein.
      
 0.510
A0A484C923
Uncharacterized protein.
    
 
 0.486
A0A484D2V9
Dynein light chain roadblock.
    
 
 0.480
A0A484DDP3
Dynein light chain roadblock.
    
 
 0.480
A0A484BYB6
Uncharacterized protein.
    
 
 0.469
A0A484CT40
Uncharacterized protein.
    
 
 0.469
A0A484C4F6
WD_REPEATS_REGION domain-containing protein.
    
 
 0.454
A0A484CRQ0
Uncharacterized protein.
      
 0.448
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
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