STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A484CAT2FYVE-type domain-containing protein. (1015 aa)    
Predicted Functional Partners:
A0A484CBH4
Uncharacterized protein.
      
 0.883
A0A484DMJ4
WD_REPEATS_REGION domain-containing protein.
    
   0.878
A0A484CLF9
3'-5' exonuclease domain-containing protein.
      
 0.867
A0A484CAV4
WD_REPEATS_REGION domain-containing protein.
    
   0.762
A0A484CY35
RING-type domain-containing protein.
      
 0.617
A0A484C5I5
Uncharacterized protein.
      
 0.506
A0A484C8C5
Uncharacterized protein.
      
 0.471
A0A484CZM9
Uncharacterized protein.
      
 0.463
A0A484D121
Uncharacterized protein.
      
 0.463
A0A484CK20
Uncharacterized protein.
      
 0.443
Your Current Organism:
Perca flavescens
NCBI taxonomy Id: 8167
Other names: Morone flavescens, P. flavescens, yellow perch
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.